Minoru Kanehisa

Most Cited Papers

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Citation   Year(Web of Science as of October 3, 2016)
1 4939 2000 Kanehisa, M. and Goto, S. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 28, 27-30. [pubmed] [pdf]
2 1659 2008 Kanehisa, M., Araki, M., Goto, S., Hattori, M., Hirakawa, M., Itoh, M., Katayama, T., Kawashima, S., Okuda, S., Tokimatsu, T., and Yamanishi, Y. KEGG for linking genomes to life and the environment. Nucleic Acids Res. 36, D480-D484. [pubmed] [pdf]
3 1562 2004 Kanehisa, M., Goto, S., Kawashima, S., Okuno, Y., and Hattori, M. The KEGG resource for deciphering the genome. Nucleic Acids Res. 32, D277-D280. [pubmed] [pdf]
4 1513 2006 Kanehisa, M., Goto, S., Hattori, M., Aoki-Kinoshita, K.F., Itoh, M., Kawashima, S., Katayama, T., Araki, M., and Hirakawa, M. From genomics to chemical genomics: new developments in KEGG. Nucleic Acids Res. 34, D354-357. [pubmed] [pdf]
5 1466 2012 Kanehisa, M., Goto, S., Sato, Y., Furumichi, M., and Tanabe, M. KEGG for integration and interpretation of large-scale molecular datasets. Nucleic Acids Res. 40, D109-D114. [pubmed] [pdf]
6 1255 1999 Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H., and Kanehisa, M. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 27, 29-34. [pubmed] [pdf]
7 1229 1992 Nakai, K. and Kanehisa, M. A knowledge base for predicting protein localization sites in eukaryotic cells. Genomics 14, 897-911. [pubmed]
- 1135 2001 Kuroda, M., et al. Whole genome sequencing of meticillin-resistant Staphylococcus aureus. Lancet 357, 1225-1240. [pubmed]
8 1047 2010 Kanehisa, M., Goto, S., Furumichi, M., Tanabe, M., and Hirakawa, M. KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res. 38, D355-D360. [pubmed] [pdf]
9 811 1985 Klein, P., Kanehisa, M., and DeLisi, C. The detection and classification of membrane-spanning proteins. Biochim. Biophys. Acta 815, 468-476. [pubmed]
10 805 2014 Kanehisa, M., Goto, S., Sato, Y., Kawashima, M., Furumichi, M., and Tanabe, M. Data, information, knowledge and principle: back to metabolism in KEGG. Nucleic Acids Res. 42, D199-D205. [pubmed] [pdf]
11 685 2007 Moriya, Y., Itoh, M., Okuda, S., Yoshizawa, A., and Kanehisa, M. KAAS: an automatic genome annotation and pathway reconstruction server. Nucleic Acids Res. 35, W182-W185. [pubmed] [pdf]
12 667 2002 Kanehisa, M., Goto, S., Kawashima, S., and Nakaya, A. The KEGG databases at GenomeNet. Nucleic Acids Res. 30, 42-46. [pubmed] [pdf]
13 530 1991 Nakai, K. and Kanehisa, M. Expert system for predicting protein localization sites in Gram-negative bacteria. Proteins 11, 95-110. [pubmed] [pdf]
14 411 2002 Kanehisa, M. The KEGG database. Novartis Found. Symp. 247, 91-103. [pubmed] [pdf]
15 323 2000 Kawashima, S. and Kanehisa, M. AAindex: Amino Acid index database. Nucleic Acids Res. 28, 374. [pubmed] [pdf]
16 320 1982 Goad, W.B. and Kanehisa, M.I. Pattern recognition in nucleic acid sequences. I. A general method for finding local homologies and symmetries. Nucleic Acids Res. 10, 247-263. [pubmed] [pdf]
17 291 2008 Kawashima, S., Pokarowski, P., Pokarowska, M., Kolinski, A., Katayama, T., and Kanehisa, M. AAindex: amino acid index database, progress report 2008. Nucleic Acids Res. 36, D202-D205 (2008). [pubmed] [pdf]
- 288 2003 Hihara, Y., Sonoike, K., Kanehisa, M., and Ikeuchi, M. DNA microarray analysis of redox responsive genes in the genome of the cyanobacterium Synechocystis sp. PCC 6803. J. Bacteriol. 185, 1719-1725. [pubmed] [pdf]
- 240 2004 Imanishi, T, et al. Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones. PLoS Biol. 2, e162. [pubmed] [pdf]
18 228 2003 Park, K.-J. and Kanehisa, M. Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs. Bioinformatics 19, 1656-1663. [pubmed] [pdf]
19 221 1999 Kawashima, S., Ogata, H., and Kanehisa, M. AAindex: amino acid index database. Nucleic Acids Res. 27, 368-369. [pubmed] [pdf]
- 220 1985 Leonard, W.J., Depper, J.M., Kanehisa, M., Kronke, M., Peffer, N.J., Svetlik, P.B., Sullivan, M., and Greene, W.C. Structure of the human interleukin-2 receptor gene. Science 230, 633-639. [pubmed]
19 213 1982 Kanehisa, M.I. Los Alamos sequence analysis package for nucleic acids and proteins. Nucleic Acids Res. 10, 183-196. [pubmed] [pdf]
21 207 1997 Kanehisa, M. A database for post-genome analysis. Trends Genet. 13, 375-376. [pubmed]
22 204 1996 Tomii, K. and Kanehisa, M. Analysis of amino acid indices and mutation matrices for sequence comparison and structure prediction of proteins. Protein Eng. 9, 27-36. [pubmed] [pdf]
- 202 2003 Brudler, R., Hitomi, K., Daiyasu, H., Toh, H., Kucho, K., Ishiura, M., Kanehisa, M., Roberts, V.A., Todo, T., Tainer, J.A., and Getzoff, E.D. Identification of a new cryptochrome class: structure, function and evolution. Mol. Cell 11, 59-67. [pubmed]
23 201 2002 Goto, S., Okuno, Y., Hattori, M., Nishioka, T. and Kanehisa, M. LIGAND: database of chemical compounds and reactions in biological pathways. Nucleic Acids Res. 30, 402-404. [pubmed] [pdf]
24 174 2008 Okuda, S., Yamada, T., Hamajima, M., Itoh, M., Katayama, T., Bork, P., Goto, S., and Kanehisa, M. KEGG Atlas mapping for global analysis of metabolic pathways. Nucleic Acids Res. 36, W423-W426 [pubmed] [pdf]
24 174 2003 Hattori, M., Okuno, Y., Goto, S., and Kanehisa, M. Development of a chemical structure comparison method for integrated analysis of chemical and genomic information in the metabolic pathways. J. Am. Chem. Soc. 125, 11853-11865 [pubmed]
26 171 2008 Yamanishi, Y., Araki, M., Gutteridge, A., Honda, W., and Kanehisa, M. Prediction of drug-target interaction networks from the integration of chemical and genomic spaces. Bioinformatics 24, i232-i240. [pubmed] [pdf]
- 163 2001 Suzuki, I., Kanesaki, Y., Mikami, K., Kanehisa, M., and Murata, N. Cold-regulated genes under control of the cold sensor Hik33 in Synechocystis. Mol. Microbiol. 40, 235-244. [pubmed] [pdf]
27 156 1988 Nakai, K., Kidera, A., and Kanehisa, M. Cluster analysis of amino acid indices for prediction of protein structure and function. Protein Eng. 2, 93-100. [pubmed]
28 128 1978 Kanehisa, M.I. and Tsong, T.Y. Cluster model of lipid phase transitions with application to passive permeation of molecules and structure relaxations in lipid bilayers. J. Am. Chem. Soc. 100, 424-432.
29 112 2006 Hashimoto, K., Goto, S., Kawano, S., Aoki-Kinoshita, K.F., Ueda, N., Hamajima, M., Kawasaki, T., and Kanehisa, M. KEGG as a glycome informatics resource. Glycobiology 16, 63R-70R (2006). [pubmed] [pdf]
30 110 2000 Ogata, H., Fujibuchi, W., Goto, S., and Kanehisa, M. A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters. Nucleic Acids Res. 28, 4021-4028. [pubmed] [pdf]
- 109 2003 Hihara, Y., Sonoike, K., Kanehisa, M., and Ikeuchi, M. DNA microarray analysis of redox responsive genes in the genome of the cyanobacterium Synechocystis sp. PCC 6803. J. Bacteriol. 185, 1719-1725 (2003). [pubmed] [pdf]
31 105 1977 Tsong, T.Y. and Kanehisa, M.I. Relaxation phenomena in aqueous dispersions of synthetic lecithins. Biochemistry 16, 2674-2680. [pubmed]
31 105 1998 Bono, H., Ogata, H., Goto, S., and Kanehisa, M. Reconstruction of amino acid biosynthesis pathways from the complete genome sequence. Genome Res. 8, 203-210. [pubmed] [pdf]
33 102 1984 Kanehisa, M. Use of statistical criteria for screening potential homologies in nucleic acid sequences. Nucleic Acids Res. 12, 203-213. [pubmed] [pdf]
33 102 2007 Aoki-Kinoshita, K.F. and Kanehisa, M. Gene annotation and pathway mapping in KEGG. Methods Mol. Biol. 396, 71-92. [pubmed]